Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805063.1_cds_XP_016492055.1_8230
CDS Infomation

[gene=LOC107811581] [db_xref=GeneID:107811581] [protein=OTU domain-containing protein 5-B-like] [protein_id=XP_016492055.1] [location=complement(join(86814..87016,87125..87299,87388..87453,87681..87826,87947..88025,88589..88666,90982..91143,91452..92126))] [gbkey=CDS]
Sequence

ATGACTCGGATACTGGTTCAGCGCGGTTCCGCTGGAGCTTCATCGTCTTCGTCCTCAAAT
CAGAACAGGTCATCTACTTCGCTCCCTGGTTCGTCTTCTTCTTCAGCTCCAACCCAGCCA
CAGGCTTCTAGTAACAGTCAGGTATTATCAGCTTCGAAAGATGATGAATTCGTAGAAGAA
ATACAAGAAGAGGTTGCTTTAGAAGAGCTCTCCATTGGTTCTTCAAACTACAAGGGTGTT
AAGGTTGACGATGGATTGTTGGATAGTTTAGGTAGCGACCAAAGCACCATTGAGGAAAAG
ATTGCTGATAATGAGACGAGAGACGGTGTTTTTGTCAGTGAGGGCCTGGCAAGGGAATAT
GATGGTTTGAGAGTTGTGGAAGTGGAAAATGAGGGAAGTTCAGTTCAGAGGGCTATATGT
AGTTCATGTCCACCTCCACCTCCTGTCCCACCACCAAAACCTGCTTCACTAAACTCGAGT
CCTAGAAGATTCCCGTTGGGTAGTTCACATGCTGGCCGTATAGGATCATCTAGGGGAACT
GCTGGGAGACCTACTGTCTCAACTAGGACCTCACCTGCTGGATCCAGGCCATCCTCTCCA
CGATCACATTGTGATGAAGGTTATAATAGTGCTGATGAGCAGAATCCCAGCTTTGGATCC
TCATATGATGATGTGGAGAGAGAACAGCAGTTTGAAATGGATCTTAGACGAACCAAAGGC
TTAGAAGTTAAGAAAATGTTGGAAGATGGGAACTGTCTCTTCCGTGCTGTTGCTGACCAA
GTATATGGTGATTCTGAAGCTTATGATTTGGTCAGGCAGATGTGCATTGACTACATGGAG
CGGGAAAGGGACCACTTCTCTCAATTTATAACTGAAGGTTTCACTTCCTATTGCAAGAGA
AAAAGGAGAGACAAGGTTTATGGCAACAATGTGGAGATTCAAGCTCTGTGTGAAATGTAT
AATCGCCCTATTCACATATACTCTTATAGCACAGAACCAATCAATACATTCCATGGAAGT
TACAATACAGACAGCCCTCCTATTCGACTCAGCTATCATCATGGAAATCATTACAACTCT
CTTGTTGATCCACGTCGACTAACAGTTGGTGCTGGCCTTGGGTTTAGCTCTCTACAAGGG
AGGAACGTTGATAAGGATCAGGTCAAAGCAGCAATAAAAGCTCAACAGGATCAGCAAATT
GATAATGCACTTCTGGCAGAAGGACGCTTTTATTCTGATCTTGAGCTCACTGAAAAGGAG
ATAGAACGCATGGTAATGGAAGCTTCTAGGGCTGAGTATATTGCCAATGACAAATTCAGG
CAGCAGTTTGGTTGTCGAGAATCTTCCACTTCTAGTGCTGAACCATCATCATCAGGAGCT
AGGTCATCAGGAAGTGAAGCGAAGCAAGAAGGTGGGGGGCGAGAAGTTCTTAGTGACTGC
ATCCAGATTATGCTGTCGATGGGATTTAGCTATGCGCGAGTAATAGAGGCTTATAGCATA
TTCGGGGATGATGTGGATTCAATGGTATGTTATCTCATTGAAACCAGCAGTAGCAGCAGA
CGTAAAGGAAAAGCAACTGAATGA

Peptide Sequence

PEP ID

XP_016492055.1
PEP Infomation

PREDICTED: OTU domain-containing protein 5-B-like [Nicotiana tabacum]
Sequence

MTRILVQRGSAGASSSSSSNQNRSSTSLPGSSSSSAPTQPQASSNSQVLSASKDDEFVEE
IQEEVALEELSIGSSNYKGVKVDDGLLDSLGSDQSTIEEKIADNETRDGVFVSEGLAREY
DGLRVVEVENEGSSVQRAICSSCPPPPPVPPPKPASLNSSPRRFPLGSSHAGRIGSSRGT
AGRPTVSTRTSPAGSRPSSPRSHCDEGYNSADEQNPSFGSSYDDVEREQQFEMDLRRTKG
LEVKKMLEDGNCLFRAVADQVYGDSEAYDLVRQMCIDYMERERDHFSQFITEGFTSYCKR
KRRDKVYGNNVEIQALCEMYNRPIHIYSYSTEPINTFHGSYNTDSPPIRLSYHHGNHYNS
LVDPRRLTVGAGLGFSSLQGRNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKE
IERMVMEASRAEYIANDKFRQQFGCRESSTSSAEPSSSGARSSGSEAKQEGGGREVLSDC
IQIMLSMGFSYARVIEAYSIFGDDVDSMVCYLIETSSSSRRKGKATE

Transcript Sequence

Gene sequence data has not been registered.